Entry Detail


General Information

Database ID:exR0451158
RNA Name:IMP3
RNA Type:mRNA
Chromosome:chr15
Starnd:-
Coordinate:
Start Site(bp):75639085End Site(bp):75648706
External Links:ENSG00000177971



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABCC10
chr6
43427366
43450427
+
AC005258.1
chr19
2269525
2341172
+
AC008764.1
chr19
16479067
16628204
-
AC118553.2
chr1
99970011
100083321
+
AC139530.2
chr17
81703371
81720539
+
ACADS
chr12
120725774
120740008
+
ACAP3
chr1
1292390
1309609
-
ACIN1
chr14
23058564
23095614
-
ACSL1
chr4
184755595
184826818
-
ACTC1
chr15
34790230
34795549
-
ACTN4
chr19
38647649
38731589
+
AFF1
chr4
86935002
87141054
+
AGPAT3
chr21
43865223
43987592
+
AGRN
chr1
1020120
1056118
+
AIMP2
chr7
6009255
6023834
+
AKT1
chr14
104769349
104795751
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC020928.2
chr19
36773712
36775908
-
AC022098.1
chr19
14137146
14171267
+
AC084082.1
chr8
66112667
66126632
+
AL121992.1
chr1
15586136
15603626
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.