Entry Detail


General Information

Database ID:exR0451165
RNA Name:IMPDH2
RNA Type:mRNA
Chromosome:chr3
Starnd:-
Coordinate:
Start Site(bp):49024325End Site(bp):49029408
External Links:ENSG00000178035



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC010422.3
chr19
12643831
12648397
-
AC011511.4
chr19
10315471
10320678
-
AC138811.2
chr16
18788063
18801519
-
AC245033.1
chr15
82536788
82573194
-
ACAT2
chr6
159762045
159779112
+
ACD
chr16
67657512
67660815
-
ACTB
chr7
5527148
5563784
-
ACTN4
chr19
38647649
38731589
+
ACTR2
chr2
65227753
65271253
+
AGPAT5
chr8
6708642
6761503
+
AHSA1
chr14
77457870
77469472
+
AICDA
chr12
8602170
8612867
-
AL121594.1
chr14
35122549
35317474
+
AL121753.1
chr20
35267885
35280043
-
AL358113.1
chr9
69035747
69255187
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC007780.1
chr17
68413623
68524949
+
AC023509.1
chr12
53441741
53467528
+
AC024940.6
chr12
31280422
31280895
-
AC067852.2
chr17
42552436
42554748
-
AC096536.3
chr1
54874672
54883664
+
AC109460.3
chr16
28974804
28990775
+
AC125807.2
chr12
3041437
3044950
+
AL022311.1
chr22
37876148
37895563
+
AL031118.1
chr6
27404010
27406964
-
AL031779.1
chr6
56331788
56332117
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.