Entry Detail


General Information

Database ID:exR0451237
RNA Name:IPO5
RNA Type:mRNA
Chromosome:chr13
Starnd:+
Coordinate:
Start Site(bp):97953658End Site(bp):98024296
External Links:ENSG00000065150



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AAGAB
chr15
67200667
67255195
-
ABCB7
chrX
75051048
75156732
-
ABCC5
chr3
183919934
184017939
-
AC008982.1
chr19
38817471
38840178
-
AC010132.3
chr7
42909273
42932174
-
AC010422.3
chr19
12643831
12648397
-
AC015813.2
chr17
57989038
58007246
-
AC091167.2
chr15
90249556
90272208
+
AC124312.1
chr15
24955034
25000276
+
ACAD10
chr12
111686056
111757107
+
ACTG1
chr17
81509971
81523847
-
ACTR3B
chr7
152759749
152855378
+
ADCY1
chr7
45574140
45723116
+
ADM
chr11
10305073
10307397
+
ADTRP
chr6
11712054
11807046
-
AGRN
chr1
1020120
1056118
+
AGTRAP
chr1
11736084
11754802
+
AHCY
chr20
34280268
34311802
-
AKAP10
chr17
19904302
19978343
-
AL049629.2
chr11
33698261
33722467
-
ALDOA
chr16
30064164
30070457
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-6850-5p
chr8
144791970
144791991
-
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC132217.1
chr11
2129121
2129964
-
AC244153.1
chr17
38450394
38452444
-
AL049543.1
chr6
28587378
28591747
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.