Entry Detail


General Information

Database ID:exR0451271
RNA Name:IRF2BPL
RNA Type:mRNA
Chromosome:chr14
Starnd:-
Coordinate:
Start Site(bp):77024543End Site(bp):77028708
External Links:ENSG00000119669



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABCB7
chrX
75051048
75156732
-
AC010422.3
chr19
12643831
12648397
-
AC129492.3
chr17
8150816
8162975
-
ACTB
chr7
5527148
5563784
-
AEBP2
chr12
19404045
19720801
+
AGPAT5
chr8
6708642
6761503
+
AHNAK
chr11
62433542
62556235
-
AL136531.2
chr20
1317571
1393096
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-625-5p
chr14
65471116
65471136
+
hsa-miR-423-5p
chr17
30117095
30117117
+
hsa-miR-1294
chr5
154347153
154347174
+
hsa-miR-6747-3p
chr11
62567011
62567031
-
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC008124.1
chr12
45718046
45727775
-
AC010442.1
chr5
466124
473098
-
AD000090.1
chr19
35557956
35581954
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.