Entry Detail


General Information

Database ID:exR0451280
RNA Name:IRGQ
RNA Type:mRNA
Chromosome:chr19
Starnd:-
Coordinate:
Start Site(bp):43584369End Site(bp):43596135
External Links:ENSG00000167378



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABHD3
chr18
21650901
21704780
-
AC245033.1
chr15
82536788
82573194
-
ACAP3
chr1
1292390
1309609
-
ACO2
chr22
41469117
41528989
+
ADGRA3
chr4
22345071
22516066
-
ADIRF
chr10
86968432
86983934
+
ADNP2
chr18
80109262
80147523
+
AGAP3
chr7
151085831
151144436
+
AKNA
chr9
114334156
114394405
-
AL139300.1
chr14
103562962
103685924
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC022613.2
chr15
29822631
29824081
+
AC245033.4
chr15
82533175
82540008
-
AD000090.1
chr19
35557956
35581954
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.