Entry Detail


General Information

Database ID:exR0451878
RNA Name:LAPTM4B
RNA Type:mRNA
Chromosome:chr8
Starnd:+
Coordinate:
Start Site(bp):97775057End Site(bp):97853013
External Links:ENSG00000104341



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AAGAB
chr15
67200667
67255195
-
ABCD3
chr1
94418389
94518666
+
ABI2
chr2
203328239
203447728
+
AC006064.6
chr12
6556886
6607367
-
AC245033.1
chr15
82536788
82573194
-
ACAT1
chr11
108116695
108147603
+
ACTR3B
chr7
152759749
152855378
+
ADAMTS10
chr19
8580240
8610735
-
AFF1
chr4
86935002
87141054
+
AHCY
chr20
34280268
34311802
-
AHDC1
chr1
27534035
27604431
-
AKT3
chr1
243488233
243851079
-
AL139300.1
chr14
103562962
103685924
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC067930.1
chr8
143579636
143580670
+
AC245033.4
chr15
82533175
82540008
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.