Entry Detail


General Information

Database ID:exR0451968
RNA Name:LGMN
RNA Type:mRNA
Chromosome:chr14
Starnd:-
Coordinate:
Start Site(bp):92703807End Site(bp):92748679
External Links:ENSG00000100600



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABCF2
chr7
151207837
151227166
-
AC005258.1
chr19
2269525
2341172
+
AC007192.1
chr19
18153158
18178117
+
AC073082.1
chr2
48632291
48755724
-
AC091959.3
chr5
146203550
146339251
+
AC092143.1
chr16
89919165
89936092
+
AC139530.2
chr17
81703371
81720539
+
AC244197.3
chrX
149477104
149540926
-
ACACB
chr12
109116595
109268226
+
AGO4
chr1
35808016
35857890
+
AHNAK
chr11
62433542
62556235
-
AICDA
chr12
8602170
8612867
-
AIMP2
chr7
6009255
6023834
+
AKAP17A
chrX
1591604
1602520
+
AL021546.1
chr12
120438198
120460006
+
ALDOA
chr16
30064164
30070457
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC007952.4
chr17
19112000
19112636
-
AC067930.1
chr8
143579636
143580670
+
AC245014.3
chr1
145281116
145281462
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.