Entry Detail


General Information

Database ID:exR0452059
RNA Name:LMNB2
RNA Type:mRNA
Chromosome:chr19
Starnd:-
Coordinate:
Start Site(bp):2427638End Site(bp):2456959
External Links:ENSG00000176619



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AASS
chr7
122073549
122144255
-
ABI3
chr17
49210411
49223225
+
AC005258.1
chr19
2269525
2341172
+
AC008878.3
chr19
7382834
7470241
+
AC011448.1
chr19
19516227
19536076
+
AC138696.1
chr8
143247110
143276403
+
AC138811.2
chr16
18788063
18801519
-
AC138969.1
chr16
16317444
16350590
+
ACTB
chr7
5527148
5563784
-
ACTG1
chr17
81509971
81523847
-
ACTN4
chr19
38647649
38731589
+
ADAM11
chr17
44758988
44781846
+
ADD1
chr4
2843857
2930076
+
ADK
chr10
74151202
74709963
+
ADM2
chr22
50481543
50486440
+
AGAP1
chr2
235494043
236131800
+
AHCY
chr20
34280268
34311802
-
AHCYL2
chr7
129225023
129430211
+
AHSA1
chr14
77457870
77469472
+
AKAP17A
chrX
1591604
1602520
+
AKT1
chr14
104769349
104795751
-
AL021546.1
chr12
120438198
120460006
+
ALAS1
chr3
52198086
52214327
+
ALDH9A1
chr1
165662216
165698863
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-4485-3p
chr11
10508277
10508296
-
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AL022157.1
chrX
57121662
57127243
+
AL096828.3
chr20
63218041
63218502
+
AL117335.1
chr20
1888128
1894374
-
AL118516.1
chr22
46761894
46762563
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.