Entry Detail


General Information

Database ID:exR0452264
RNA Name:LY6E
RNA Type:mRNA
Chromosome:chr8
Starnd:+
Coordinate:
Start Site(bp):143017982End Site(bp):143023832
External Links:ENSG00000160932



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC004922.1
chr7
99325879
99394653
+
AC008763.3
chr19
7678501
7682854
+
AC020909.1
chr19
50415799
50428409
+
AC092073.1
chr19
34396315
34409364
+
ACLY
chr17
41866917
41930542
-
ACTA1
chr1
229431245
229434098
-
ADNP
chr20
50888916
50931437
-
AHNAK
chr11
62433542
62556235
-
AIF1L
chr9
131096476
131123152
+
AIP
chr11
67483026
67491103
+
AKAP8
chr19
15353385
15379798
-
ALDH3A2
chr17
19648136
19685760
+
ALDOA
chr16
30064164
30070457
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-15b-5p
chr3
160404607
160404628
+
hsa-miR-299-3p
chr14
101023832
101023853
+
hsa-miR-424-5p
chrX
134546680
134546701
-
hsa-miR-654-5p
chr14
101040234
101040255
+
hsa-miR-541-3p
chr14
101064548
101064569
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AL022311.1
chr22
37876148
37895563
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.