Entry Detail


General Information

Database ID:exR0452422
RNA Name:MAP4
RNA Type:mRNA
Chromosome:chr3
Starnd:-
Coordinate:
Start Site(bp):47850690End Site(bp):48089272
External Links:ENSG00000047849



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABCB10
chr1
229516582
229558707
-
ABCF2
chr7
151207837
151227166
-
AC006064.6
chr12
6556886
6607367
-
AC104109.3
chr5
134167170
134226071
-
AC138811.2
chr16
18788063
18801519
-
ACADVL
chr17
7217125
7225266
+
ACTG1
chr17
81509971
81523847
-
ADGRA3
chr4
22345071
22516066
-
AKAP17A
chrX
1591604
1602520
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-122-5p
chr18
58451088
58451109
+
hsa-miR-326
chr11
75335108
75335127
-
hsa-miR-330-5p
chr19
45639049
45639070
-
hsa-miR-423-5p
chr17
30117095
30117117
+
hsa-miR-513c-5p
chrX
147189753
147189774
-
hsa-miR-1321
chrX
85835832
85835849
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AL022311.1
chr22
37876148
37895563
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.