Entry Detail


General Information

Database ID:exR0452447
RNA Name:MAPK8IP3
RNA Type:mRNA
Chromosome:chr16
Starnd:+
Coordinate:
Start Site(bp):1706183End Site(bp):1770317
External Links:ENSG00000138834



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABHD2
chr15
89087459
89202355
+
AC005943.1
chr19
1578339
1605445
-
AC068580.4
chr11
1734821
1763954
-
AC120057.2
chr17
7240427
7244635
-
AC245033.1
chr15
82536788
82573194
-
ADGRV1
chr5
90529344
91164437
+
ADSL
chr22
40346500
40390463
+
AFG3L2
chr18
12328944
12377227
-
AGAP3
chr7
151085831
151144436
+
AGO3
chr1
35930718
36072500
+
AGO4
chr1
35808016
35857890
+
AL022238.4
chr22
40346529
40410054
+
AL133352.1
chr10
100505628
100529881
-
ALDH18A1
chr10
95605941
95656711
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC067930.1
chr8
143579636
143580670
+
AC093827.4
chr4
86924630
86936202
-
AC245033.4
chr15
82533175
82540008
-
AL031710.2
chr16
1707252
1707973
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.