Entry Detail


General Information

Database ID:exR0452471
RNA Name:MARCKSL1
RNA Type:mRNA
Chromosome:chr1
Starnd:-
Coordinate:
Start Site(bp):32333839End Site(bp):32336233
External Links:ENSG00000175130



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABCD4
chr14
74285269
74303055
-
ABCF3
chr3
184186023
184194012
+
AC005832.4
chr12
4604944
4662643
+
AC008581.2
chr5
77030902
77152155
+
AC008982.1
chr19
38817471
38840178
-
AC010422.3
chr19
12643831
12648397
-
AC011448.1
chr19
19516227
19536076
+
AC012254.2
chr18
47108188
47176345
-
AC091959.3
chr5
146203550
146339251
+
ACAA1
chr3
38103129
38137242
-
ACACA
chr17
37084992
37406836
-
ACD
chr16
67657512
67660815
-
ACIN1
chr14
23058564
23095614
-
ACO2
chr22
41469117
41528989
+
ACTB
chr7
5527148
5563784
-
ACTG1
chr17
81509971
81523847
-
ACTR3
chr2
113890063
113962596
+
ADAM17
chr2
9488486
9556732
-
ADAMTS13
chr9
133414358
133459402
+
ADAMTS2
chr5
179110853
179345461
-
ADD1
chr4
2843857
2930076
+
ADIPOR1
chr1
202940826
202958572
-
AGGF1
chr5
77029251
77065234
+
AGL
chr1
99850361
99924023
+
AHDC1
chr1
27534035
27604431
-
AIF1L
chr9
131096476
131123152
+
AKT1
chr14
104769349
104795751
-
AL136454.1
chr1
192716132
192716653
+
AL365205.1
chr6
41780349
41790141
+
AL807752.6
chr9
137031241
137040436
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-let-7a-5p
chr9
94175962
94175983
+
hsa-let-7b-5p
chr22
46113691
46113712
+
hsa-let-7g-5p
chr3
52268336
52268357
-
hsa-miR-541-3p
chr14
101064548
101064569
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC026362.1
chr12
122975320
122982907
+
AC060780.1
chr17
43148368
43171037
-
AC067852.2
chr17
42552436
42554748
-
AC069281.2
chr7
100572232
100578700
-
AC097359.2
chr3
37241789
37244177
-
AC104257.1
chr8
131308545
131317632
+
AC112229.4
chr2
110386411
110433673
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.