Entry Detail


General Information

Database ID:exR0452544
RNA Name:MCM3
RNA Type:mRNA
Chromosome:chr6
Starnd:-
Coordinate:
Start Site(bp):52264014End Site(bp):52284881
External Links:ENSG00000112118



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC010132.3
chr7
42909273
42932174
-
AC022384.1
chr3
10249372
10285796
+
ACTG1
chr17
81509971
81523847
-
ACTR3
chr2
113890063
113962596
+
ADNP
chr20
50888916
50931437
-
AFDN
chr6
167826922
167972023
+
AFF4
chr5
132875395
132963634
-
AL138752.2
chr9
37588413
38068687
-
AL513165.2
chr9
37512547
37592469
-
ALDOA
chr16
30064164
30070457
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-92a-3p
chrX
134169544
134169565
-
hsa-miR-629-5p
chr15
70079427
70079447
-
hsa-miR-1244
chr2
231713368
231713393
+
hsa-miR-4521
chr17
8186948
8186969
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC074032.1
chr12
50112197
50165618
+
AJ239328.1
chr21
45914296
45919483
+
AL021368.3
chr6
57855891
57856468
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.