Entry Detail


General Information

Database ID:exR0452759
RNA Name:MIF
RNA Type:mRNA
Chromosome:chr22
Starnd:+
Coordinate:
Start Site(bp):23894383End Site(bp):23895227
External Links:ENSG00000240972



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AIF1L
chr9
131096476
131123152
+
AC120057.2
chr17
7240427
7244635
-
AL139300.1
chr14
103562962
103685924
+
AHNAK
chr11
62433542
62556235
-
AIMP2
chr7
6009255
6023834
+
AC024592.3
chr19
5866171
5903787
-
AL121594.1
chr14
35122549
35317474
+
ACTR1B
chr2
97655939
97664044
-
ALDH1L1
chr3
126103562
126197994
-
ABCF1
chr6
30571393
30597179
+
AC007192.1
chr19
18153158
18178117
+
ABRACL
chr6
139028745
139043302
+
AHCY
chr20
34280268
34311802
-
AL645941.2
chr6
32937364
32953122
-
ALDH3A2
chr17
19648136
19685760
+
ACAP3
chr1
1292390
1309609
-
AC091167.2
chr15
90249556
90272208
+
AC010422.3
chr19
12643831
12648397
-
ABCD3
chr1
94418389
94518666
+
AC131160.1
chr3
183815568
183884889
-
AC010132.3
chr7
42909273
42932174
-
AL365205.1
chr6
41780349
41790141
+
ACTB
chr7
5527148
5563784
-
ALDH9A1
chr1
165662216
165698863
-
AC040162.1
chr16
67929614
67936017
-
AAAS
chr12
53307456
53324864
-
AIDA
chr1
222668013
222713210
-
AKR7A2
chr1
19303965
19312146
-
ACTR2
chr2
65227753
65271253
+
ACAP1
chr17
7336529
7351477
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-320a-3p
chr8
22244975
22244996
-
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC004241.1
chr12
47706083
47742294
+
AC016876.2
chr17
7581964
7584086
-
AC023790.2
chr12
13000451
13040679
+
AC026362.1
chr12
122975320
122982907
+
AC051619.7
chr15
45200325
45200632
-
AC108134.2
chr16
3156736
3157483
-
AC245014.3
chr1
145281116
145281462
+
AL022311.1
chr22
37876148
37895563
+
AL121992.1
chr1
15586136
15603626
-
AL137782.1
chr13
75549773
75807120
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.