Entry Detail


General Information

Database ID:exR0453063
RNA Name:MT-ATP6
RNA Type:mRNA
Chromosome:chrMT
Starnd:+
Coordinate:
Start Site(bp):8527End Site(bp):9207
External Links:ENSG00000198899



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AAK1
chr2
69457997
69674349
-
AC004922.1
chr7
99325879
99394653
+
AC012254.2
chr18
47108188
47176345
-
AC091167.2
chr15
90249556
90272208
+
AC138811.2
chr16
18788063
18801519
-
ACTR1A
chr10
102461881
102502712
-
ACTR3
chr2
113890063
113962596
+
ACTR8
chr3
53867066
53882152
-
ADD1
chr4
2843857
2930076
+
ADNP2
chr18
80109262
80147523
+
ADRA2A
chr10
111077029
111080907
+
AFAP1
chr4
7758714
7939926
-
AFTPH
chr2
64524305
64593005
+
AHCY
chr20
34280268
34311802
-
AHNAK
chr11
62433542
62556235
-
AHSA1
chr14
77457870
77469472
+
AJUBA
chr14
22971177
22982551
-
AK3
chr9
4709556
4742043
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC004687.1
chr17
58330884
58332508
-
AC007952.4
chr17
19112000
19112636
-
AC016876.2
chr17
7581964
7584086
-
AC018521.1
chr17
47945424
47981736
+
AC020978.7
chr16
68224713
68227734
+
AD000090.1
chr19
35557956
35581954
+
AL049795.2
chr1
32170733
32176568
+
AL138759.1
chr10
94577439
94611238
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.