Entry Detail


General Information

Database ID:exR0453066
RNA Name:MT-CO2
RNA Type:mRNA
Chromosome:chrMT
Starnd:+
Coordinate:
Start Site(bp):7586End Site(bp):8269
External Links:ENSG00000198712



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC048338.1
chr12
122207779
122266423
-
AEBP2
chr12
19404045
19720801
+
AIF1L
chr9
131096476
131123152
+
ABCC10
chr6
43427366
43450427
+
ACTB
chr7
5527148
5563784
-
ADAM22
chr7
87934143
88202889
+
AKT1
chr14
104769349
104795751
-
ADCY9
chr16
3953387
4116442
-
ACTN4
chr19
38647649
38731589
+
ACTG1
chr17
81509971
81523847
-
AC011511.1
chr19
10305427
10316009
-
ABCA3
chr16
2275881
2340746
-
ABHD17A
chr19
1876810
1885547
-
AKAP8L
chr19
15380050
15419141
-
ALDH1A2
chr15
57953424
58497866
-
AL358113.1
chr9
69035747
69255187
+
AC008764.1
chr19
16479067
16628204
-
ACBD6
chr1
180269653
180502954
-
ACTN1
chr14
68874143
68979440
-
AL136295.4
chr14
24180395
24190416
-
AC007192.1
chr19
18153158
18178117
+
ACOT9
chrX
23701055
23766475
-
AC091167.2
chr15
90249556
90272208
+
AHI1
chr6
135283532
135497765
-
ABCD1
chrX
153724856
153744755
+
AL133352.1
chr10
100505628
100529881
-
AFG3L2
chr18
12328944
12377227
-
ABCC1
chr16
15949577
16143074
+
AC010132.3
chr7
42909273
42932174
-
AIG1
chr6
143060496
143341058
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-1825
chr20
32237830
32237847
+
hsa-miR-3648
chr21
8987026
8987046
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC006064.5
chr12
6510275
6510522
+
AC007952.4
chr17
19112000
19112636
-
AC016876.2
chr17
7581964
7584086
-
AC020663.1
chr16
4730115
4752565
-
AC027307.2
chr19
1457670
1458580
-
AC040162.3
chr16
67882461
67886367
+
AC051619.7
chr15
45200325
45200632
-
AC067930.1
chr8
143579636
143580670
+
AC083880.1
chr7
139359032
139359566
-
AC097478.1
chr4
89743792
89744305
+
AC124312.3
chr15
25087661
25088896
+
AC125257.1
chr17
41848518
41851447
-
AD000090.1
chr19
35557956
35581954
+
AL022311.1
chr22
37876148
37895563
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.