Entry Detail


General Information

Database ID:exR0453071
RNA Name:MT-ND3
RNA Type:mRNA
Chromosome:chrMT
Starnd:+
Coordinate:
Start Site(bp):10059End Site(bp):10404
External Links:ENSG00000198840



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABCC1
chr16
15949577
16143074
+
AC005832.4
chr12
4604944
4662643
+
AC008758.5
chr19
12391949
12441082
-
AC012254.2
chr18
47108188
47176345
-
AC018523.2
chr11
14493783
14520344
-
AC073508.2
chr17
40627356
40665141
-
AC092143.1
chr16
89919165
89936092
+
AC093155.3
chr1
86993009
87169204
+
AC245033.1
chr15
82536788
82573194
-
ACAA2
chr18
49782164
49813953
-
ACAP2
chr3
195274745
195443044
-
ACTR1A
chr10
102461881
102502712
-
ACTR2
chr2
65227753
65271253
+
ADNP
chr20
50888916
50931437
-
ADPRHL2
chr1
36088892
36093932
+
ADRM1
chr20
62302093
62308862
+
AHCY
chr20
34280268
34311802
-
AHCYL1
chr1
109984765
110023742
+
AIF1L
chr9
131096476
131123152
+
AIMP1
chr4
106315544
106349456
+
AK2
chr1
33007940
33080996
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC016747.4
chr2
61115787
61164825
+
AC016876.2
chr17
7581964
7584086
-
AC022819.1
chr15
99157231
99161140
-
AC245014.3
chr1
145281116
145281462
+
AC245033.4
chr15
82533175
82540008
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.