Entry Detail


General Information

Database ID:exR0453720
RNA Name:NONO
RNA Type:mRNA
Chromosome:chrX
Starnd:+
Coordinate:
Start Site(bp):71283192End Site(bp):71301168
External Links:ENSG00000147140



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABL1
chr9
130713016
130887675
+
AC006064.6
chr12
6556886
6607367
-
AC010422.3
chr19
12643831
12648397
-
AC011455.2
chr19
38915404
38949855
-
AC078927.1
chr12
66123917
66169985
-
ACADVL
chr17
7217125
7225266
+
ACER3
chr11
76860867
77026797
+
ACSS3
chr12
80936414
81261210
+
ACTR6
chr12
100199122
100241865
+
AGAP4
chr10
45825594
45853875
-
AHCY
chr20
34280268
34311802
-
AIF1L
chr9
131096476
131123152
+
AKT2
chr19
40230317
40285536
-
AL049779.1
chr14
67659820
67690367
-
AL133352.1
chr10
100505628
100529881
-
ALDH1B1
chr9
38392702
38398661
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-379-5p
chr14
101022071
101022091
+
hsa-miR-338-3p
chr17
81125887
81125908
-
hsa-miR-650
chr22
22822791
22822811
+
hsa-miR-941
chr20
63919551
63919573
+
hsa-miR-3654
chr7
133034860
133034878
-
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC023509.1
chr12
53441741
53467528
+
AC092490.1
chr12
8788253
8795789
+
AC132217.1
chr11
2129121
2129964
-
AD000090.1
chr19
35557956
35581954
+
AL022311.1
chr22
37876148
37895563
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.