Entry Detail


General Information

Database ID:exR0453832
RNA Name:NRIP1
RNA Type:mRNA
Chromosome:chr21
Starnd:-
Coordinate:
Start Site(bp):14961235End Site(bp):15065936
External Links:ENSG00000180530



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ACACB
chr12
109116595
109268226
+
ACTB
chr7
5527148
5563784
-
ACVR2B
chr3
38453890
38493142
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-105-5p
chrX
152394458
152394480
-
hsa-miR-214-3p
chr1
172138816
172138837
-
hsa-miR-200c-3p
chr12
6963742
6963764
+
hsa-miR-362-5p
chrX
50008968
50008991
+
hsa-miR-324-5p
chr17
7223343
7223364
-
hsa-miR-520a-5p
chr19
53690895
53690915
+
hsa-miR-455-5p
chr9
114209449
114209470
+
hsa-miR-501-3p
chrX
50009772
50009793
+
hsa-miR-502-3p
chrX
50014649
50014670
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AF127577.4
chr21
14818843
15014430
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.