Entry Detail


General Information

Database ID:exR0455410
RNA Name:PRPF8
RNA Type:mRNA
Chromosome:chr17
Starnd:-
Coordinate:
Start Site(bp):1650629End Site(bp):1684867
External Links:ENSG00000174231



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AATF
chr17
36948954
37056871
+
ABL1
chr9
130713016
130887675
+
AC002985.1
chr19
18907013
18934397
-
AC093155.3
chr1
86993009
87169204
+
AC244197.3
chrX
149477104
149540926
-
ACAD11
chr3
132558138
132660082
-
ACTG1
chr17
81509971
81523847
-
ACTL6A
chr3
179562886
179588407
+
ADCY3
chr2
24819169
24919839
-
ADORA2A
chr22
24417879
24442357
+
AGRN
chr1
1020120
1056118
+
ALDH18A1
chr10
95605941
95656711
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC007952.4
chr17
19112000
19112636
-
AD000090.1
chr19
35557956
35581954
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.