Entry Detail


General Information

Database ID:exR0455792
RNA Name:RABL6
RNA Type:mRNA
Chromosome:chr9
Starnd:+
Coordinate:
Start Site(bp):136807943End Site(bp):136841187
External Links:ENSG00000196642



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AADAT
chr4
170060222
170091699
-
AC008982.1
chr19
38817471
38840178
-
AC099811.2
chr17
42119674
42154916
-
ACAP3
chr1
1292390
1309609
-
ACTR3
chr2
113890063
113962596
+
AD000671.1
chr19
35745678
35754519
+
AFAP1
chr4
7758714
7939926
-
AKT1S1
chr19
49869033
49878459
-
AKT2
chr19
40230317
40285536
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC009133.5
chr16
29808679
29812227
+
AC124068.2
chr15
89335053
89336161
+
AD000090.1
chr19
35557956
35581954
+
AL049796.1
chr1
93847174
93848939
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.