Entry Detail


General Information

Database ID:exR0455932
RNA Name:RBM15B
RNA Type:mRNA
Chromosome:chr3
Starnd:+
Coordinate:
Start Site(bp):51391285End Site(bp):51397908
External Links:ENSG00000259956



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABCA2
chr9
137007234
137028922
-
AC010422.5
chr19
12664828
12669397
-
AC027644.4
chr7
66628958
66811189
+
AC138811.2
chr16
18788063
18801519
-
AC139530.2
chr17
81703371
81720539
+
ACAD10
chr12
111686056
111757107
+
ACOT7
chr1
6264269
6394391
-
ADGRL1
chr19
14147743
14206187
-
AHCY
chr20
34280268
34311802
-
AL669918.1
chr6
32813767
32838822
-
ALAS1
chr3
52198086
52214327
+
ALDH4A1
chr1
18871430
18902724
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-4709-3p
chr14
74480135
74480157
-
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC010542.4
chr16
66549280
66551189
+
AC027644.3
chr7
66739829
66740385
-
AC067930.1
chr8
143579636
143580670
+
AC100861.1
chr8
23224471
23230926
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.