Entry Detail


General Information

Database ID:exR0456251
RNA Name:RNF167
RNA Type:mRNA
Chromosome:chr17
Starnd:+
Coordinate:
Start Site(bp):4940008End Site(bp):4945222
External Links:ENSG00000108523



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC004922.1
chr7
99325879
99394653
+
AC048338.1
chr12
122207779
122266423
-
ACAA2
chr18
49782164
49813953
-
ACTB
chr7
5527148
5563784
-
ACTL6A
chr3
179562886
179588407
+
ACTR8
chr3
53867066
53882152
-
ADCY6
chr12
48766194
48789037
-
ADD1
chr4
2843857
2930076
+
ADGRE5
chr19
14380501
14408725
+
ADH5
chr4
99070978
99088801
-
AFG3L2
chr18
12328944
12377227
-
AIFM1
chrX
130129362
130165887
-
AK2
chr1
33007940
33080996
-
AKT1
chr14
104769349
104795751
-
AL928654.3
chr14
105487199
105492267
+
ALCAM
chr3
105366909
105576900
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC132217.1
chr11
2129121
2129964
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.