Entry Detail


General Information

Database ID:exR0456382
RNA Name:RPL38
RNA Type:mRNA
Chromosome:chr17
Starnd:+
Coordinate:
Start Site(bp):74203582End Site(bp):74210655
External Links:ENSG00000172809



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC005258.1
chr19
2269525
2341172
+
AC011462.1
chr19
41350853
41425001
+
AC023055.1
chr12
55757275
55827546
-
AC048338.1
chr12
122207779
122266423
-
AC098484.3
chr1
42767292
42794493
+
AC104109.3
chr5
134167170
134226071
-
AC120057.2
chr17
7240427
7244635
-
ACADVL
chr17
7217125
7225266
+
ACTB
chr7
5527148
5563784
-
ACTG1
chr17
81509971
81523847
-
ACTL6A
chr3
179562886
179588407
+
ACTN4
chr19
38647649
38731589
+
ACTR2
chr2
65227753
65271253
+
ADCY1
chr7
45574140
45723116
+
ADGRA3
chr4
22345071
22516066
-
AEN
chr15
88621337
88632281
+
AHCY
chr20
34280268
34311802
-
AKAP7
chr6
131135467
131283535
+
AKNA
chr9
114334156
114394405
-
ALAS1
chr3
52198086
52214327
+
ALDH5A1
chr6
24494867
24537207
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC005618.1
chr5
141326210
141329357
+
AC144548.1
chr12
110387463
110445548
-
AD000090.1
chr19
35557956
35581954
+
AL022311.1
chr22
37876148
37895563
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.