Entry Detail


General Information

Database ID:exR0456387
RNA Name:RPL5
RNA Type:mRNA
Chromosome:chr1
Starnd:+
Coordinate:
Start Site(bp):92832013End Site(bp):92841924
External Links:ENSG00000122406



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABCB4
chr7
87401697
87480435
-
AC004922.1
chr7
99325879
99394653
+
AGTPBP1
chr9
85546539
85742029
-
ACO1
chr9
32384603
32454769
+
AL136454.1
chr1
192716132
192716653
+
ALDH18A1
chr10
95605941
95656711
-
ACTR3
chr2
113890063
113962596
+
ADSL
chr22
40346500
40390463
+
AC073896.1
chr12
56285916
56316059
-
AC015802.6
chr17
76563710
76570544
-
AC091167.2
chr15
90249556
90272208
+
AGK
chr7
141551278
141655244
+
ACIN1
chr14
23058564
23095614
-
AGO1
chr1
35869808
35930532
+
AASS
chr7
122073549
122144255
-
ABL1
chr9
130713016
130887675
+
AL022238.4
chr22
40346529
40410054
+
AL365273.2
chr10
95860548
95924844
+
ACP6
chr1
147629652
147670524
-
ACVR1B
chr12
51951699
51997078
+
ALDOA
chr16
30064164
30070457
+
ACTR2
chr2
65227753
65271253
+
AGA
chr4
177430774
177442437
-
AK2
chr1
33007940
33080996
-
AEN
chr15
88621337
88632281
+
ADNP2
chr18
80109262
80147523
+
AC073612.1
chr12
71674204
71698968
+
AL121594.1
chr14
35122549
35317474
+
ACTB
chr7
5527148
5563784
-
AGRN
chr1
1020120
1056118
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-3654
chr7
133034860
133034878
-
hsa-miR-4426
chr1
192716333
192716349
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC010163.1
chr10
78293842
78301003
+
AC018521.1
chr17
47945424
47981736
+
AC022167.2
chr16
8848105
8860456
+
AC024940.6
chr12
31280422
31280895
-
AC104461.1
chr1
200333193
200478669
+
AC132217.1
chr11
2129121
2129964
-
AC139149.1
chr17
81514047
81527776
+
AD000090.1
chr19
35557956
35581954
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.