Entry Detail


General Information

Database ID:exR0456393
RNA Name:RPL9
RNA Type:mRNA
Chromosome:chr4
Starnd:-
Coordinate:
Start Site(bp):39452521End Site(bp):39458949
External Links:ENSG00000163682



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABCG2
chr4
88090150
88231628
-
AC104581.2
chr17
7925931
7930622
-
AC245033.1
chr15
82536788
82573194
-
ACP1
chr2
264140
278283
+
ACTB
chr7
5527148
5563784
-
ACTG1
chr17
81509971
81523847
-
ACYP1
chr14
75053237
75069483
-
ADAM10
chr15
58588809
58749791
-
ADAM17
chr2
9488486
9556732
-
ADD1
chr4
2843857
2930076
+
ADD3
chr10
109996368
110135565
+
ADH5
chr4
99070978
99088801
-
ADIPOR1
chr1
202940826
202958572
-
ADORA2A
chr22
24417879
24442357
+
AGO2
chr8
140520156
140635633
-
AL136454.1
chr1
192716132
192716653
+
ALDOA
chr16
30064164
30070457
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-146a-5p
chr5
160485372
160485393
+
hsa-miR-4426
chr1
192716333
192716349
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC007406.5
chr12
273954
277123
-
AC009446.1
chr8
71675300
71702786
+
AC016876.2
chr17
7581964
7584086
-
AC067852.1
chr17
42536510
42562062
+
AC087190.3
chr16
9104848
9113181
+
AC145285.6
chr16
28822431
28823969
-
AC245014.3
chr1
145281116
145281462
+
AC245033.4
chr15
82533175
82540008
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.