Entry Detail


General Information

Database ID:exR0456396
RNA Name:RPLP2
RNA Type:mRNA
Chromosome:chr11
Starnd:+
Coordinate:
Start Site(bp):809965End Site(bp):812880
External Links:ENSG00000177600



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC010646.1
chr19
17235940
17255448
-
ALDOA
chr16
30064164
30070457
+
AL139300.1
chr14
103562962
103685924
+
AC011455.2
chr19
38915404
38949855
-
AGO4
chr1
35808016
35857890
+
AKAP1
chr17
57085092
57121346
+
AC007192.1
chr19
18153158
18178117
+
AC135050.2
chr16
31083439
31094956
-
ADGRL2
chr1
81306160
81992436
+
AC010422.3
chr19
12643831
12648397
-
AC020915.5
chr19
58228914
58315183
+
AKT2
chr19
40230317
40285536
-
AFTPH
chr2
64524305
64593005
+
ACIN1
chr14
23058564
23095614
-
AIFM1
chrX
130129362
130165887
-
AC004922.1
chr7
99325879
99394653
+
AL049629.2
chr11
33698261
33722467
-
ADCY1
chr7
45574140
45723116
+
ACTG1
chr17
81509971
81523847
-
AFDN
chr6
167826922
167972023
+
AC005258.1
chr19
2269525
2341172
+
ADRM1
chr20
62302093
62308862
+
AL121594.1
chr14
35122549
35317474
+
ALDH18A1
chr10
95605941
95656711
-
AGRN
chr1
1020120
1056118
+
ADH5
chr4
99070978
99088801
-
AACS
chr12
125065434
125143333
+
AGBL5
chr2
27042364
27070622
+
ABCF1
chr6
30571393
30597179
+
AC008878.3
chr19
7382834
7470241
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-7705
chr8
100703002
100703024
-
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC007780.1
chr17
68413623
68524949
+
AC017104.1
chr2
231388976
231394991
+
AC018521.1
chr17
47945424
47981736
+
AC026362.1
chr12
122975320
122982907
+
AD000090.1
chr19
35557956
35581954
+
AL137782.1
chr13
75549773
75807120
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.