Entry Detail


General Information

Database ID:exR0456413
RNA Name:RPS11
RNA Type:mRNA
Chromosome:chr19
Starnd:+
Coordinate:
Start Site(bp):49496365End Site(bp):49499708
External Links:ENSG00000142534



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC245033.1
chr15
82536788
82573194
-
ADCY1
chr7
45574140
45723116
+
ADAR
chr1
154582057
154628013
-
AK2
chr1
33007940
33080996
-
ADGRL1
chr19
14147743
14206187
-
ADH5
chr4
99070978
99088801
-
AC131160.1
chr3
183815568
183884889
-
AAGAB
chr15
67200667
67255195
-
ACTG1
chr17
81509971
81523847
-
AL138752.2
chr9
37588413
38068687
-
ABCE1
chr4
145098288
145129524
+
AIP
chr11
67483026
67491103
+
AC010422.3
chr19
12643831
12648397
-
AC099811.2
chr17
42119674
42154916
-
AC079594.2
chr3
160227454
160449829
-
AL603832.3
chr1
112702614
112711433
-
ABHD18
chr4
127965306
128039927
+
ADGRL2
chr1
81306160
81992436
+
AC138811.2
chr16
18788063
18801519
-
AKIRIN1
chr1
38991276
39006059
+
AL162231.3
chr9
34646645
34657113
+
ALDH18A1
chr10
95605941
95656711
-
AC004922.1
chr7
99325879
99394653
+
ACSS2
chr20
34872146
34927962
+
AC007192.1
chr19
18153158
18178117
+
AC005258.1
chr19
2269525
2341172
+
ADAM10
chr15
58588809
58749791
-
AFDN
chr6
167826922
167972023
+
AL133352.1
chr10
100505628
100529881
-
ALDOA
chr16
30064164
30070457
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-210-3p
chr11
568112
568133
-
hsa-miR-632
chr17
32350169
32350187
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC004687.1
chr17
58330884
58332508
-
AC010624.2
chr19
50075123
50075902
+
AC108134.2
chr16
3156736
3157483
-
AD000090.1
chr19
35557956
35581954
+
AL117378.1
chr6
131901963
131920565
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.