Entry Detail


General Information

Database ID:exR0456416
RNA Name:RPS14
RNA Type:mRNA
Chromosome:chr5
Starnd:-
Coordinate:
Start Site(bp):150442635End Site(bp):150449739
External Links:ENSG00000164587



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC068580.4
chr11
1734821
1763954
-
ALDOA
chr16
30064164
30070457
+
ACTG1
chr17
81509971
81523847
-
ACTB
chr7
5527148
5563784
-
ADSL
chr22
40346500
40390463
+
AL136295.1
chr14
24189157
24213473
-
ABLIM1
chr10
114431113
114768061
-
AHCYL1
chr1
109984765
110023742
+
ALDH2
chr12
111766887
111817532
+
ADARB1
chr21
45073853
45226560
+
AC004922.1
chr7
99325879
99394653
+
AC009133.6
chr16
29812261
29820092
+
AASS
chr7
122073549
122144255
-
ACSL4
chrX
109624244
109733403
-
AFAP1
chr4
7758714
7939926
-
AL136295.4
chr14
24180395
24190416
-
AHCYL2
chr7
129225023
129430211
+
AL160269.1
chr9
96235331
96352058
-
ADI1
chr2
3497366
3519531
-
ACTR3
chr2
113890063
113962596
+
ADGRE5
chr19
14380501
14408725
+
AL513165.2
chr9
37512547
37592469
-
AKAP1
chr17
57085092
57121346
+
AC026954.2
chr17
7312661
7319174
-
AL162417.1
chr9
133098121
133163914
-
AKAP17A
chrX
1591604
1602520
+
AL133352.1
chr10
100505628
100529881
-
ADPGK
chr15
72751369
72785846
-
AC027796.3
chr17
3585149
3636249
-
AC004832.3
chr22
30409255
30428990
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-103a-3p
chr5
168560904
168560926
-
hsa-miR-3654
chr7
133034860
133034878
-
hsa-miR-6891-3p
chr6
31355228
31355248
-
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC004687.1
chr17
58330884
58332508
-
AC010642.2
chr19
58309727
58327248
-
AC013268.5
chr2
109937438
109985124
+
AC018521.5
chr17
47891229
47895812
-
AC024940.6
chr12
31280422
31280895
-
AC040162.3
chr16
67882461
67886367
+
AC063949.2
chr12
92421531
92483680
+
AC104109.4
chr5
134205614
134371044
-
AC125257.1
chr17
41848518
41851447
-
AC132217.1
chr11
2129121
2129964
-
AD000090.1
chr19
35557956
35581954
+
AL022311.1
chr22
37876148
37895563
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.