Entry Detail


General Information

Database ID:exR0456420
RNA Name:RPS17
RNA Type:mRNA
Chromosome:chr15
Starnd:-
Coordinate:
Start Site(bp):82536750End Site(bp):82540459
External Links:ENSG00000182774



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABCA3
chr16
2275881
2340746
-
AC004832.3
chr22
30409255
30428990
+
AC007192.1
chr19
18153158
18178117
+
AC011005.1
chr7
129126518
129130793
+
AC011462.1
chr19
41350853
41425001
+
AC020909.1
chr19
50415799
50428409
+
AC024592.3
chr19
5866171
5903787
-
AC025165.3
chr12
57772660
57797554
+
AC245033.1
chr15
82536788
82573194
-
ACAD9
chr3
128879596
128916067
+
ACO2
chr22
41469117
41528989
+
ACTB
chr7
5527148
5563784
-
ACTC1
chr15
34790230
34795549
-
ACTN1
chr14
68874143
68979440
-
ACTN4
chr19
38647649
38731589
+
ACTR1A
chr10
102461881
102502712
-
ACTR3
chr2
113890063
113962596
+
ADO
chr10
62804720
62808479
+
AHCYL1
chr1
109984765
110023742
+
AK3
chr9
4709556
4742043
-
AL110118.2
chr14
93184973
93218586
+
AL121845.3
chr20
63708864
63739103
+
AL132780.3
chr14
22946270
22982258
-
AL133352.1
chr10
100505628
100529881
-
AL590764.2
chrX
71103987
71111575
-
AL603832.3
chr1
112702614
112711433
-
ALDOA
chr16
30064164
30070457
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-155-5p
chr21
25573983
25574006
+
hsa-miR-155-3p
chr21
25574022
25574043
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC016876.2
chr17
7581964
7584086
-
AC025181.2
chr5
32174471
32175272
+
AC026304.1
chr3
143000907
143001467
-
AC026362.1
chr12
122975320
122982907
+
AC087482.1
chr15
66984103
67065268
-
AC091564.7
chr11
6610883
6616594
-
AC114763.1
chr2
138418284
138501698
-
AC124312.5
chr15
25091786
25107469
-
AC132217.1
chr11
2129121
2129964
-
AC245033.4
chr15
82533175
82540008
-
AD000090.1
chr19
35557956
35581954
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.