Entry Detail


General Information

Database ID:exR0456421
RNA Name:RPS18
RNA Type:mRNA
Chromosome:chr6
Starnd:+
Coordinate:
Start Site(bp):33272075End Site(bp):33276511
External Links:ENSG00000231500



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AHCY
chr20
34280268
34311802
-
AKIRIN1
chr1
38991276
39006059
+
AC015802.6
chr17
76563710
76570544
-
AC024592.3
chr19
5866171
5903787
-
ABRACL
chr6
139028745
139043302
+
ABTB2
chr11
34150987
34358010
-
ADGRL2
chr1
81306160
81992436
+
AIFM1
chrX
130129362
130165887
-
ALDOA
chr16
30064164
30070457
+
AKR1A1
chr1
45550543
45570049
+
AC005258.1
chr19
2269525
2341172
+
AFG3L2
chr18
12328944
12377227
-
ABCB7
chrX
75051048
75156732
-
AGO2
chr8
140520156
140635633
-
AASDH
chr4
56338287
56387508
-
AKT1S1
chr19
49869033
49878459
-
AC011462.1
chr19
41350853
41425001
+
ACTB
chr7
5527148
5563784
-
AEBP2
chr12
19404045
19720801
+
ACTR3
chr2
113890063
113962596
+
AAR2
chr20
36236459
36270918
+
AC008982.1
chr19
38817471
38840178
-
ACAA2
chr18
49782164
49813953
-
AC007040.2
chr2
70939318
70995336
-
ADRA2A
chr10
111077029
111080907
+
AC011005.1
chr7
129126518
129130793
+
AC023055.1
chr12
55757275
55827546
-
ACTR2
chr2
65227753
65271253
+
AC010422.3
chr19
12643831
12648397
-
AC073508.2
chr17
40627356
40665141
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC004080.6
chr7
27128969
27152561
-
AC004687.1
chr17
58330884
58332508
-
AC021078.1
chr5
149494314
149504670
-
AC040162.3
chr16
67882461
67886367
+
AC091564.7
chr11
6610883
6616594
-
AC105339.2
chr15
82752884
82757208
+
AC138089.1
chr1
248484245
248485484
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.