Entry Detail


General Information

Database ID:exR0456425
RNA Name:RPS20
RNA Type:mRNA
Chromosome:chr8
Starnd:-
Coordinate:
Start Site(bp):56067295End Site(bp):56074581
External Links:ENSG00000008988



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABT1
chr6
26596953
26600739
+
AC005258.1
chr19
2269525
2341172
+
AC006064.6
chr12
6556886
6607367
-
AC008750.8
chr19
51350373
51368099
-
AC091167.2
chr15
90249556
90272208
+
AC093827.5
chr4
86886472
86936178
-
AC120057.2
chr17
7240427
7244635
-
AC135050.2
chr16
31083439
31094956
-
ACOT1
chr14
73537143
73543796
+
ACTB
chr7
5527148
5563784
-
ACTG1
chr17
81509971
81523847
-
ACTR10
chr14
58200080
58235636
+
ACTR1B
chr2
97655939
97664044
-
ADAP1
chr7
897900
955407
-
ADNP2
chr18
80109262
80147523
+
ADSL
chr22
40346500
40390463
+
AGA
chr4
177430774
177442437
-
AGO3
chr1
35930718
36072500
+
AL022238.4
chr22
40346529
40410054
+
AL096711.2
chr6
127438406
127519001
-
AL132780.3
chr14
22946270
22982258
-
AL358113.1
chr9
69035747
69255187
+
ALDH4A1
chr1
18871430
18902724
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC064802.1
chr8
114282067
114295839
+
AC092117.1
chr16
2777319
2780568
+
AC132217.1
chr11
2129121
2129964
-
AC140125.2
chr5
177782197
177794396
+
AC144652.1
chr7
155295918
155297541
-
AC245297.2
chr1
149264252
149264816
+
AL031282.2
chr1
1702736
1737688
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.