Entry Detail


General Information

Database ID:exR0456429
RNA Name:RPS25
RNA Type:mRNA
Chromosome:chr11
Starnd:-
Coordinate:
Start Site(bp):119015712End Site(bp):119018691
External Links:ENSG00000118181



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABI2
chr2
203328239
203447728
+
AC004922.1
chr7
99325879
99394653
+
AC091167.2
chr15
90249556
90272208
+
AC092647.5
chr7
55887277
55955239
+
ACAD9
chr3
128879596
128916067
+
ACSS3
chr12
80936414
81261210
+
ACTA1
chr1
229431245
229434098
-
ACTB
chr7
5527148
5563784
-
ACTG1
chr17
81509971
81523847
-
ADCK2
chr7
140672945
140696261
+
ADCY3
chr2
24819169
24919839
-
ADD1
chr4
2843857
2930076
+
ADD3
chr10
109996368
110135565
+
ADPRH
chr3
119579268
119589945
+
AFG3L2
chr18
12328944
12377227
-
AGFG1
chr2
227472152
227561214
+
AGK
chr7
141551278
141655244
+
AGPAT3
chr21
43865223
43987592
+
AICDA
chr12
8602170
8612867
-
AKAP13
chr15
85380571
85749358
+
AKAP17A
chrX
1591604
1602520
+
ALDOA
chr16
30064164
30070457
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-1248
chr3
186786675
186786701
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC026362.1
chr12
122975320
122982907
+
AC026464.2
chr16
69463844
69466264
+
AC121761.2
chr12
75333798
75334486
-
AC126365.1
chr17
20788071
20789584
+
AC132217.1
chr11
2129121
2129964
-
AD000090.1
chr19
35557956
35581954
+
AL021707.1
chr22
38739003
38749041
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.