Entry Detail


General Information

Database ID:exR0456440
RNA Name:RPS5
RNA Type:mRNA
Chromosome:chr19
Starnd:+
Coordinate:
Start Site(bp):58386400End Site(bp):58394806
External Links:ENSG00000083845



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AGFG2
chr7
100539203
100568220
+
AL358113.1
chr9
69035747
69255187
+
AKAP1
chr17
57085092
57121346
+
ACO2
chr22
41469117
41528989
+
AL022238.4
chr22
40346529
40410054
+
AC004832.3
chr22
30409255
30428990
+
AC007192.1
chr19
18153158
18178117
+
AC139530.2
chr17
81703371
81720539
+
AC010422.3
chr19
12643831
12648397
-
AC092073.1
chr19
34396315
34409364
+
AC040162.1
chr16
67929614
67936017
-
ABRACL
chr6
139028745
139043302
+
ACTN4
chr19
38647649
38731589
+
AHDC1
chr1
27534035
27604431
-
AHCYL1
chr1
109984765
110023742
+
AHCY
chr20
34280268
34311802
-
ACTR1B
chr2
97655939
97664044
-
ACTB
chr7
5527148
5563784
-
ALDOA
chr16
30064164
30070457
+
AK2
chr1
33007940
33080996
-
AC008763.3
chr19
7678501
7682854
+
AC002985.1
chr19
18907013
18934397
-
AC011462.1
chr19
41350853
41425001
+
ABHD10
chr3
111979010
111993368
+
AC018523.2
chr11
14493783
14520344
-
AC104452.1
chr3
49416777
49429314
-
AHSA1
chr14
77457870
77469472
+
ABCC1
chr16
15949577
16143074
+
ADSL
chr22
40346500
40390463
+
AACS
chr12
125065434
125143333
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-1244
chr2
231713368
231713393
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC026362.1
chr12
122975320
122982907
+
AC091564.7
chr11
6610883
6616594
-
AC121761.1
chr12
75483454
75489820
-
AD000090.1
chr19
35557956
35581954
+
AL121832.3
chr20
62402236
62405935
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.