Entry Detail


General Information

Database ID:exR0456441
RNA Name:RPS6
RNA Type:mRNA
Chromosome:chr9
Starnd:-
Coordinate:
Start Site(bp):19375715End Site(bp):19380236
External Links:ENSG00000137154



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ALDH5A1
chr6
24494867
24537207
+
AL365205.1
chr6
41780349
41790141
+
AC093668.1
chr7
102541501
102592444
-
AKR1E2
chr10
4786629
4848062
+
ADCY5
chr3
123282296
123449758
-
AC093155.3
chr1
86993009
87169204
+
ACTR2
chr2
65227753
65271253
+
ABCF1
chr6
30571393
30597179
+
AC138696.1
chr8
143247110
143276403
+
ALDOA
chr16
30064164
30070457
+
AATF
chr17
36948954
37056871
+
AC105052.1
chr7
102582523
102642869
-
ABCF3
chr3
184186023
184194012
+
AL136454.1
chr1
192716132
192716653
+
ADIPOR1
chr1
202940826
202958572
-
ALDH6A1
chr14
74056847
74084492
-
AARD
chr8
116938207
116944487
+
ACOT13
chr6
24667035
24705065
+
ACKR3
chr2
236567787
236582354
+
AHSA1
chr14
77457870
77469472
+
AL139300.1
chr14
103562962
103685924
+
ABHD14B
chr3
51968510
51983409
-
AGAP3
chr7
151085831
151144436
+
AL136295.3
chr14
24120956
24131829
+
AC040162.1
chr16
67929614
67936017
-
AL121594.1
chr14
35122549
35317474
+
ACO2
chr22
41469117
41528989
+
AC009133.6
chr16
29812261
29820092
+
ALDH9A1
chr1
165662216
165698863
-
AARSD1
chr17
42950526
42964498
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-26a-2-3p
chr12
57824620
57824641
-
hsa-miR-4426
chr1
192716333
192716349
+
hsa-miR-7705
chr8
100703002
100703024
-
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC005899.4
chr17
32328441
32329395
+
AC012236.1
chr15
31221999
31230838
-
AC016044.1
chr15
52800168
52805972
-
AC016876.2
chr17
7581964
7584086
-
AC023509.1
chr12
53441741
53467528
+
AC115284.1
chr3
51961212
51974031
-
AC135048.1
chr16
30948386
30956511
+
AC245014.3
chr1
145281116
145281462
+
AC245033.4
chr15
82533175
82540008
-
AL022311.1
chr22
37876148
37895563
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.