Entry Detail


General Information

Database ID:exR0456453
RNA Name:RPS8
RNA Type:mRNA
Chromosome:chr1
Starnd:+
Coordinate:
Start Site(bp):44775251End Site(bp):44778779
External Links:ENSG00000142937



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ACVR1B
chr12
51951699
51997078
+
AL021546.1
chr12
120438198
120460006
+
AC073508.2
chr17
40627356
40665141
-
AC008758.1
chr19
12461559
12551474
-
ACAT1
chr11
108116695
108147603
+
AC120057.2
chr17
7240427
7244635
-
AC138811.2
chr16
18788063
18801519
-
ADNP
chr20
50888916
50931437
-
AHCYL1
chr1
109984765
110023742
+
AGL
chr1
99850361
99924023
+
ABI3
chr17
49210411
49223225
+
ACTG1
chr17
81509971
81523847
-
ACTR1B
chr2
97655939
97664044
-
ACTA2
chr10
88935074
88991339
-
AL136295.5
chr14
24147548
24166452
+
ABRACL
chr6
139028745
139043302
+
AKIRIN1
chr1
38991276
39006059
+
AKT1
chr14
104769349
104795751
-
ACTA1
chr1
229431245
229434098
-
AL669918.1
chr6
32813767
32838822
-
AHRR
chr5
271670
438291
+
ABCD4
chr14
74285269
74303055
-
AGPAT3
chr21
43865223
43987592
+
AEN
chr15
88621337
88632281
+
AC002985.1
chr19
18907013
18934397
-
AKR7A2
chr1
19303965
19312146
-
ADRM1
chr20
62302093
62308862
+
AC022384.1
chr3
10249372
10285796
+
ADAR
chr1
154582057
154628013
-
ADD1
chr4
2843857
2930076
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-92a-3p
chrX
134169544
134169565
-
hsa-miR-367-3p
chr4
112647877
112647898
-
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC063949.2
chr12
92421531
92483680
+
AC090772.3
chr18
24159509
24162211
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.