Entry Detail


General Information

Database ID:exR0456454
RNA Name:RPS9
RNA Type:mRNA
Chromosome:chr19
Starnd:+
Coordinate:
Start Site(bp):54200809End Site(bp):54249003
External Links:ENSG00000170889



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ADRM1
chr20
62302093
62308862
+
AL021546.1
chr12
120438198
120460006
+
ALDH16A1
chr19
49453225
49471050
+
AC007192.1
chr19
18153158
18178117
+
AHSA1
chr14
77457870
77469472
+
ADGRG5
chr16
57542643
57591681
+
AGAP4
chr10
45825594
45853875
-
AC105052.3
chr7
102637049
102671641
-
ABRACL
chr6
139028745
139043302
+
ADAM8
chr10
133262420
133276868
-
AGGF1
chr5
77029251
77065234
+
ADAM10
chr15
58588809
58749791
-
ACTB
chr7
5527148
5563784
-
AKT1S1
chr19
49869033
49878459
-
AC004922.1
chr7
99325879
99394653
+
ACAA2
chr18
49782164
49813953
-
AC120057.2
chr17
7240427
7244635
-
AHCY
chr20
34280268
34311802
-
ACVR2B
chr3
38453890
38493142
+
AASDHPPT
chr11
106075501
106098699
+
ACER3
chr11
76860867
77026797
+
ACOT2
chr14
73567620
73575658
+
AC245033.1
chr15
82536788
82573194
-
ABLIM1
chr10
114431113
114768061
-
AC138811.2
chr16
18788063
18801519
-
ADNP
chr20
50888916
50931437
-
AFDN
chr6
167826922
167972023
+
ABHD17B
chr9
71862452
71910931
-
AKNA
chr9
114334156
114394405
-
ACTG1
chr17
81509971
81523847
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-3615
chr17
74748663
74748683
+
hsa-miR-4707-5p
chr14
22956998
22957020
-
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC004069.1
chr4
105137280
105140619
-
AC022400.3
chr10
73674295
73730466
-
AC073508.3
chr17
40648300
40649718
+
AC132217.1
chr11
2129121
2129964
-
AC245014.3
chr1
145281116
145281462
+
AD000090.1
chr19
35557956
35581954
+
AL139089.1
chr13
52651305
52652279
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.