Entry Detail


General Information

Database ID:exR0456858
RNA Name:SERBP1
RNA Type:mRNA
Chromosome:chr1
Starnd:-
Coordinate:
Start Site(bp):67407810End Site(bp):67430415
External Links:ENSG00000142864



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABCB7
chrX
75051048
75156732
-
ABLIM1
chr10
114431113
114768061
-
AC007192.1
chr19
18153158
18178117
+
AC008763.3
chr19
7678501
7682854
+
AC010422.3
chr19
12643831
12648397
-
AC011511.4
chr19
10315471
10320678
-
AC093525.2
chr16
2496032
2520218
+
AC112229.3
chr2
110402934
110473075
-
AC135050.2
chr16
31083439
31094956
-
AC245033.1
chr15
82536788
82573194
-
ACAD8
chr11
134253495
134265855
+
ACTA1
chr1
229431245
229434098
-
ACTB
chr7
5527148
5563784
-
ACTG1
chr17
81509971
81523847
-
AD000671.2
chr19
35739252
35745432
-
ADAR
chr1
154582057
154628013
-
ADCY6
chr12
48766194
48789037
-
ADD3
chr10
109996368
110135565
+
ADSL
chr22
40346500
40390463
+
AGBL5
chr2
27042364
27070622
+
AHCYL1
chr1
109984765
110023742
+
AKAP1
chr17
57085092
57121346
+
AKR7A3
chr1
19282573
19288770
-
AL022238.4
chr22
40346529
40410054
+
AL109827.1
chr20
35632340
35674544
-
AL136295.5
chr14
24147548
24166452
+
ALDOA
chr16
30064164
30070457
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-526b-5p
chr19
53694406
53694428
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC007952.4
chr17
19112000
19112636
-
AC010327.5
chr19
55216660
55221616
+
AC022148.1
chr19
37545470
37549171
-
AC023509.1
chr12
53441741
53467528
+
AC245014.3
chr1
145281116
145281462
+
AC245033.4
chr15
82533175
82540008
-
AD000090.1
chr19
35557956
35581954
+
AL133520.1
chr20
46681676
46682375
-
AL137026.2
chr10
44259602
44261813
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.