Entry Detail


General Information

Database ID:exR0457907
RNA Name:SRP9
RNA Type:mRNA
Chromosome:chr1
Starnd:+
Coordinate:
Start Site(bp):225777813End Site(bp):225790468
External Links:ENSG00000143742



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABCD3
chr1
94418389
94518666
+
ABHD17B
chr9
71862452
71910931
-
ABI2
chr2
203328239
203447728
+
ABRACL
chr6
139028745
139043302
+
AC010132.3
chr7
42909273
42932174
-
AC091167.2
chr15
90249556
90272208
+
AC099811.2
chr17
42119674
42154916
-
ACTA1
chr1
229431245
229434098
-
ADGRL2
chr1
81306160
81992436
+
AHR
chr7
16916359
17346152
+
AIF1
chr6
31615217
31617021
+
AL136454.1
chr1
192716132
192716653
+
ALCAM
chr3
105366909
105576900
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC009446.1
chr8
71675300
71702786
+
AC027031.2
chr8
106270144
106272902
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.