Entry Detail


General Information

Database ID:exR0458076
RNA Name:STRAP
RNA Type:mRNA
Chromosome:chr12
Starnd:+
Coordinate:
Start Site(bp):15882387End Site(bp):15903478
External Links:ENSG00000023734



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABRACL
chr6
139028745
139043302
+
AC008575.1
chr5
112827213
112867582
+
AC025165.3
chr12
57772660
57797554
+
AC087289.3
chr17
75898645
75930129
-
AC091167.2
chr15
90249556
90272208
+
AC091167.6
chr15
90266317
90314499
+
AC138811.2
chr16
18788063
18801519
-
ADAMTS1
chr21
26835755
26845409
-
ADGRL2
chr1
81306160
81992436
+
ADGRL3
chr4
61201258
62078335
+
ADPRHL2
chr1
36088892
36093932
+
AHRR
chr5
271670
438291
+
AK2
chr1
33007940
33080996
-
ALDH18A1
chr10
95605941
95656711
-
ALDOA
chr16
30064164
30070457
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC064802.1
chr8
114282067
114295839
+
AL022311.1
chr22
37876148
37895563
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.