Entry Detail


General Information

Database ID:exR0458147
RNA Name:SUPT16H
RNA Type:mRNA
Chromosome:chr14
Starnd:-
Coordinate:
Start Site(bp):21351476End Site(bp):21384019
External Links:ENSG00000092201



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABCA5
chr17
69244311
69327244
-
ABCC4
chr13
95019835
95301475
-
ABCG2
chr4
88090150
88231628
-
AC022384.1
chr3
10249372
10285796
+
AC073508.2
chr17
40627356
40665141
-
AC087289.3
chr17
75898645
75930129
-
ACBD6
chr1
180269653
180502954
-
ACTG1
chr17
81509971
81523847
-
ACTN1
chr14
68874143
68979440
-
ACTR1B
chr2
97655939
97664044
-
AFDN
chr6
167826922
167972023
+
AGTPBP1
chr9
85546539
85742029
-
AKR1A1
chr1
45550543
45570049
+
ALDH7A1
chr5
126531200
126595362
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC007952.4
chr17
19112000
19112636
-
AC011731.1
chr18
23257164
23260354
-
AC024940.6
chr12
31280422
31280895
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.