Entry Detail


General Information

Database ID:exR0459137
RNA Name:TPI1
RNA Type:mRNA
Chromosome:chr12
Starnd:+
Coordinate:
Start Site(bp):6867119End Site(bp):6870948
External Links:ENSG00000111669



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ADAMTS8
chr11
130404923
130428609
-
ADCY6
chr12
48766194
48789037
-
AC020915.5
chr19
58228914
58315183
+
ABLIM1
chr10
114431113
114768061
-
ACTB
chr7
5527148
5563784
-
ABCF3
chr3
184186023
184194012
+
AC004922.1
chr7
99325879
99394653
+
AGBL5
chr2
27042364
27070622
+
ALDH16A1
chr19
49453225
49471050
+
AC007192.1
chr19
18153158
18178117
+
AHSA1
chr14
77457870
77469472
+
ACTG1
chr17
81509971
81523847
-
ACADS
chr12
120725774
120740008
+
AC022384.1
chr3
10249372
10285796
+
AL355916.3
chr14
61529128
61657964
+
AC011455.2
chr19
38915404
38949855
-
ACIN1
chr14
23058564
23095614
-
AC245033.1
chr15
82536788
82573194
-
AC091167.2
chr15
90249556
90272208
+
ACSS2
chr20
34872146
34927962
+
AL360181.3
chr10
133380017
133420271
+
ACY1
chr3
51983340
51989197
+
AC124312.1
chr15
24955034
25000276
+
ACTR2
chr2
65227753
65271253
+
ACLY
chr17
41866917
41930542
-
ALDH2
chr12
111766887
111817532
+
ABCF1
chr6
30571393
30597179
+
AC093323.1
chr4
6663396
6676755
+
AHCY
chr20
34280268
34311802
-
AKAP1
chr17
57085092
57121346
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC004687.1
chr17
58330884
58332508
-
AC007952.4
chr17
19112000
19112636
-
AC009446.1
chr8
71675300
71702786
+
AC023509.1
chr12
53441741
53467528
+
AC026362.1
chr12
122975320
122982907
+
AC068768.1
chr12
123262060
123262402
+
AC079781.5
chr7
97851688
97972985
-
AC092306.1
chr19
44803701
44804010
+
AC106864.1
chr4
112693047
112706810
-
AC245033.4
chr15
82533175
82540008
-
AD000090.1
chr19
35557956
35581954
+
AL136419.1
chr14
23969931
24051377
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.