Entry Detail


General Information

Database ID:exR0459367
RNA Name:TSPAN14
RNA Type:mRNA
Chromosome:chr10
Starnd:+
Coordinate:
Start Site(bp):80454166End Site(bp):80533124
External Links:ENSG00000108219



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AL589666.1
chr6
85557978
85615234
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-7-5p
chr19
4770700
4770723
+
hsa-miR-212-3p
chr17
2050290
2050310
-
hsa-miR-132-3p
chr17
2049929
2049950
-
hsa-miR-185-5p
chr22
20033153
20033174
+
hsa-miR-155-5p
chr21
25573983
25574006
+
hsa-miR-326
chr11
75335108
75335127
-
hsa-miR-193b-3p
chr16
14304017
14304038
+
hsa-miR-588
chr6
126484646
126484666
+
hsa-miR-760
chr1
93846880
93846899
+
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.