Entry Detail


General Information

Database ID:exR0459478
RNA Name:TUBB4B
RNA Type:mRNA
Chromosome:chr9
Starnd:+
Coordinate:
Start Site(bp):137241287End Site(bp):137243707
External Links:ENSG00000188229



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABHD5
chr3
43690108
43734371
+
ABLIM1
chr10
114431113
114768061
-
AC004922.1
chr7
99325879
99394653
+
AC008764.1
chr19
16479067
16628204
-
AC011511.4
chr19
10315471
10320678
-
AC068533.4
chr7
66087761
66152277
+
AC092143.1
chr16
89919165
89936092
+
ACBD6
chr1
180269653
180502954
-
ACLY
chr17
41866917
41930542
-
ACSS2
chr20
34872146
34927962
+
ACTR2
chr2
65227753
65271253
+
ADAM10
chr15
58588809
58749791
-
AEBP2
chr12
19404045
19720801
+
AEN
chr15
88621337
88632281
+
AGO4
chr1
35808016
35857890
+
AGRN
chr1
1020120
1056118
+
AIMP2
chr7
6009255
6023834
+
AKAP7
chr6
131135467
131283535
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC008105.3
chr17
45190931
45222222
-
AC008738.5
chr19
33301279
33301940
+
AC016355.1
chr15
67541072
67542604
-
AC022075.1
chr12
10363638
10398506
+
AD000090.1
chr19
35557956
35581954
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.