Entry Detail



General Information

Database ID:exR0459569
RNA Name:UBC
RNA Type:mRNA
Chromosome:chr12
Starnd:-
Coordinate:
Start Site(bp):124911604End Site(bp):124917368
External Links:ENSG00000150991



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABCF2
chr7
151207837
151227166
-
AC008982.1
chr19
38817471
38840178
-
AC018523.2
chr11
14493783
14520344
-
AC026954.2
chr17
7312661
7319174
-
AC118553.2
chr1
99970011
100083321
+
AC124312.1
chr15
24955034
25000276
+
AC138811.2
chr16
18788063
18801519
-
ACADVL
chr17
7217125
7225266
+
ACOT2
chr14
73567620
73575658
+
ACP5
chr19
11574660
11579008
-
ACTB
chr7
5527148
5563784
-
ACTG1
chr17
81509971
81523847
-
ACY1
chr3
51983340
51989197
+
ADAM10
chr15
58588809
58749791
-
ADIPOR2
chr12
1688574
1788674
+
AEN
chr15
88621337
88632281
+
AFF1
chr4
86935002
87141054
+
AFP
chr4
73431138
73456174
+
AGPAT1
chr6
32168212
32178096
-
AKIRIN2
chr6
87674860
87702233
-
AL133352.1
chr10
100505628
100529881
-
AL136295.1
chr14
24189157
24213473
-
AL136295.4
chr14
24180395
24190416
-
AL136454.1
chr1
192716132
192716653
+
ALDOA
chr16
30064164
30070457
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-492
chr12
94834427
94834449
+
hsa-miR-1244
chr2
231713368
231713393
+
hsa-miR-4426
chr1
192716333
192716349
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC048341.1
chr12
62602752
62622213
+
AC069281.2
chr7
100572232
100578700
-
AC091564.7
chr11
6610883
6616594
-
AC139149.1
chr17
81514047
81527776
+
AL022311.1
chr22
37876148
37895563
+
AL117378.1
chr6
131901963
131920565
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.