Entry Detail


General Information

Database ID:exR0460142
RNA Name:YBX3
RNA Type:mRNA
Chromosome:chr12
Starnd:-
Coordinate:
Start Site(bp):10699089End Site(bp):10723323
External Links:ENSG00000060138



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AAAS
chr12
53307456
53324864
-
ABHD10
chr3
111979010
111993368
+
AC011462.1
chr19
41350853
41425001
+
AC092329.3
chr19
23222755
23274221
-
ACAP3
chr1
1292390
1309609
-
ACAT2
chr6
159762045
159779112
+
ACIN1
chr14
23058564
23095614
-
ACTN4
chr19
38647649
38731589
+
ADAM10
chr15
58588809
58749791
-
AHCY
chr20
34280268
34311802
-
AHSA1
chr14
77457870
77469472
+
AKAP8L
chr19
15380050
15419141
-
ALAD
chr9
113386312
113401290
-
ALDOA
chr16
30064164
30070457
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC004846.1
chr14
73242651
73245979
-
AC092329.1
chr19
23257255
23274232
-
AC092329.4
chr19
23259906
23274251
-
AC106864.1
chr4
112693047
112706810
-
AC132217.1
chr11
2129121
2129964
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.