Entry Detail


General Information

Database ID:exR0460176
RNA Name:YWHAQ
RNA Type:mRNA
Chromosome:chr2
Starnd:-
Coordinate:
Start Site(bp):9583967End Site(bp):9630997
External Links:ENSG00000134308



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AAGAB
chr15
67200667
67255195
-
ABCA2
chr9
137007234
137028922
-
ABCB7
chrX
75051048
75156732
-
ABCC4
chr13
95019835
95301475
-
ABI2
chr2
203328239
203447728
+
ABRACL
chr6
139028745
139043302
+
AC010323.1
chr19
8308283
8321379
-
AC011005.1
chr7
129126518
129130793
+
AC018523.2
chr11
14493783
14520344
-
AC245033.1
chr15
82536788
82573194
-
ACADSB
chr10
123008979
123058290
+
ACAP1
chr17
7336529
7351477
+
ACTN4
chr19
38647649
38731589
+
ADAT2
chr6
143422832
143450695
-
ADO
chr10
62804720
62808479
+
AFTPH
chr2
64524305
64593005
+
AKAP13
chr15
85380571
85749358
+
ALDOA
chr16
30064164
30070457
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-5047
chr17
64501230
64501250
-
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC023509.1
chr12
53441741
53467528
+
AC079781.5
chr7
97851688
97972985
-
AC126365.1
chr17
20788071
20789584
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.