Entry Detail


General Information

Database ID:exR0461019
RNA Name:hsa-miR-196a-5p
RNA Type:miRNA
Chromosome:chr17
Starnd:-
Coordinate:
Start Site(bp):48632532End Site(bp):48632553
External Links:hsa-miR-196a-5p



Disease Information

Disease Name:Clear Cell Renal Cell Carcinoma
Disease Category:Cancers
MeSH ID:D002292
Type:Neoplasms/Urogenital Neoplasms
Alias:Carcinoma, Renal Cell//Carcinomas, Renal Cell//Renal Cell Carcinomas//Adenocarcinoma, Renal Cell//Adenocarcinomas, Renal Cell//Renal Cell Adenocarcinoma//Renal Cell Adenocarcinomas//Adenocarcinoma Of Kidney//Adenocarcinoma Of Kidneys//Kidney, Adenocarcinoma Of//Kidneys, Adenocarcinoma Of//Renal Cell Cancer//Cancer, Renal Cell//Cancers, Renal Cell//Renal Cell Cancers//Adenocarcinoma, Renal//Adenocarcinomas, Renal//Renal Adenocarcinoma//Renal Adenocarcinomas//Nephroid Carcinoma//Carcinoma, Nephroid//Carcinomas, Nephroid//Nephroid Carcinomas//Renal Cell Carcinoma//Chromophobe Renal Cell Carcinoma//Sarcomatoid Renal Cell Carcinoma//Papillary Renal Cell Carcinoma//Renal Cell Carcinoma, Papillary//Chromophil Renal Cell Carcinoma//Clear Cell Renal Cell Carcinoma//Grawitz Tumor//Tumor, Grawitz//Clear Cell Renal Carcinoma//Carcinoma, Hypernephroid//Carcinomas, Hypernephroid//Hypernephroid Carcinoma//Hypernephroid Carcinomas//Hypernephroma//Hypernephromas//Collecting Duct Carcinoma (Kidney)//Carcinoma, Collecting Duct (Kidney)//Carcinomas, Collecting Duct (Kidney)//Collecting Duct Carcinomas (Kidney)//Collecting Duct Carcinoma of the Kidney//Renal Collecting Duct Carcinoma//Collecting Duct Carcinoma//Carcinoma, Collecting Duct//Carcinomas, Collecting Duct//Collecting Duct Carcinomas



Expression Detail

GEO ID:GSE129255
Description:Urinary exosome miR-30c-5p as a biomarker of clear cell renal cell carcinoma that inhibits progression by targeting HSPA5
Experimental Design:Cancer vs Control
Case Disease Type:Clear Cell Renal Cell Carcinoma
Case Disease SubType:NA
Case Sample:Clear Cell Renal Cell Carcinoma
Control Sample:Healthy
Number of Case:3
Number of Control:1
Number of Samples:4





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ACP1
chr2
264140
278283
+
ARHGAP28
chr18
6729718
6915716
+
ARL5A
chr2
151788984
151828492
-
C15orf41
chr15
36579626
36810248
+
C19orf53
chr19
13774456
13778773
+
CBFA2T3
chr16
88874858
88977207
-
COL6A2
chr21
46098112
46132848
+
CS
chr12
56271699
56300391
-
FAM222B
chr17
28755978
28855232
-
FNBP4
chr11
47716494
47767443
-
HOXA7
chr7
27153716
27157936
-
IGDCC3
chr15
65327127
65378002
-
IGF2BP1
chr17
48997385
49056145
+
LDOC1
chrX
141111605
141177129
-
PDE6D
chr2
231732433
231786272
-
PFKFB3
chr10
6144934
6254644
+
TMEM161B
chr5
88189633
88269476
-
XPO4
chr13
20777329
20903048
-
ZMYND11
chr10
134465
254637
+
miRNA targets:NA
circRNA targets:
circRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa_circ_0001454
chr4
154524454
154533552
+
hsa_circ_0000095
chr1
95609446
95616975
+
hsa_circ_0001522
chr5
122881110
122893258
+
hsa_circ_0000799
chr17
65941524
65972074
+
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC005034.3
chr2
75697583
75697996
+
ARHGAP27P1-BPTFP1-KPNA2P3
chr17
64749663
64781707
-
FGD5-AS1
chr3
14920347
14948424
-
GAS5
chr1
173858559
173868882
-
H19
chr11
1995176
2001470
-
KCNQ1OT1
chr11
2608328
2699994
-
NEAT1
chr11
65422774
65445540
+
SNHG16
chr17
76557764
76565348
+
SNHG3
chr1
28505980
28510892
+
TUG1
chr22
30969245
30979395
+
XIST
chrX
73820649
73852723
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA