Entry Detail


General Information

Database ID:exR0461078
RNA Name:hsa-miR-330-3p
RNA Type:miRNA
Chromosome:chr19
Starnd:-
Coordinate:
Start Site(bp):45639009End Site(bp):45639031
External Links:hsa-miR-330-3p



Disease Information

Disease Name:Clear Cell Renal Cell Carcinoma
Disease Category:Cancers
MeSH ID:D002292
Type:Neoplasms/Urogenital Neoplasms
Alias:Carcinoma, Renal Cell//Carcinomas, Renal Cell//Renal Cell Carcinomas//Adenocarcinoma, Renal Cell//Adenocarcinomas, Renal Cell//Renal Cell Adenocarcinoma//Renal Cell Adenocarcinomas//Adenocarcinoma Of Kidney//Adenocarcinoma Of Kidneys//Kidney, Adenocarcinoma Of//Kidneys, Adenocarcinoma Of//Renal Cell Cancer//Cancer, Renal Cell//Cancers, Renal Cell//Renal Cell Cancers//Adenocarcinoma, Renal//Adenocarcinomas, Renal//Renal Adenocarcinoma//Renal Adenocarcinomas//Nephroid Carcinoma//Carcinoma, Nephroid//Carcinomas, Nephroid//Nephroid Carcinomas//Renal Cell Carcinoma//Chromophobe Renal Cell Carcinoma//Sarcomatoid Renal Cell Carcinoma//Papillary Renal Cell Carcinoma//Renal Cell Carcinoma, Papillary//Chromophil Renal Cell Carcinoma//Clear Cell Renal Cell Carcinoma//Grawitz Tumor//Tumor, Grawitz//Clear Cell Renal Carcinoma//Carcinoma, Hypernephroid//Carcinomas, Hypernephroid//Hypernephroid Carcinoma//Hypernephroid Carcinomas//Hypernephroma//Hypernephromas//Collecting Duct Carcinoma (Kidney)//Carcinoma, Collecting Duct (Kidney)//Carcinomas, Collecting Duct (Kidney)//Collecting Duct Carcinomas (Kidney)//Collecting Duct Carcinoma of the Kidney//Renal Collecting Duct Carcinoma//Collecting Duct Carcinoma//Carcinoma, Collecting Duct//Carcinomas, Collecting Duct//Collecting Duct Carcinomas



Expression Detail

GEO ID:GSE129255
Description:Urinary exosome miR-30c-5p as a biomarker of clear cell renal cell carcinoma that inhibits progression by targeting HSPA5
Experimental Design:Cancer vs Control
Case Disease Type:Clear Cell Renal Cell Carcinoma
Case Disease SubType:NA
Case Sample:Clear Cell Renal Cell Carcinoma
Control Sample:Healthy
Number of Case:3
Number of Control:1
Number of Samples:4





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ANP32B
chr9
97983341
98015943
+
ATRX
chrX
77504878
77786233
-
BCL2L11
chr2
111119378
111168445
+
CBX2
chr17
79778148
79787983
+
CCSER2
chr10
84328586
84518521
+
CRCP
chr7
66114604
66154568
+
DAG1
chr3
49468703
49535618
+
ERLIN1
chr10
100150094
100186033
-
GNAI2
chr3
50226292
50259362
+
HNRNPAB
chr5
178204533
178211163
+
MRFAP1
chr4
6640091
6642745
+
MTMR12
chr5
32226994
32312987
-
NPAT
chr11
108157215
108222638
-
PFN1
chr17
4945652
4949061
-
PKN2
chr1
88684222
88836255
+
RAB10
chr2
26034084
26137454
+
SNX27
chr1
151612006
151699091
+
TNKS
chr8
9555912
9782346
+
TOMM34
chr20
44942130
44960397
-
TRIM25
chr17
56836387
56914080
-
miRNA targets:NA
circRNA targets:
circRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa_circ_0000591
chr15
41961025
41962156
+
hsa_circ_0000540
chr14
55799534
55821940
+
hsa_circ_0001731
chr7
100731990
100738448
+
hsa_circ_0001168
chr20
47691321
47707559
+
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC020978.7
chr16
68224713
68227734
+
AC079781.5
chr7
97851688
97972985
-
AC124045.1
chr3
44667412
44669364
+
AC125257.1
chr17
41848518
41851447
-
AL132655.1
chr20
58833809
58836529
-
AL137129.1
chr14
61734138
61776260
+
AL157392.3
chr10
13631143
13668445
+
FGD5-AS1
chr3
14920347
14948424
-
MIR663AHG
chr20
26167817
26251546
-
NEAT1
chr11
65422774
65445540
+
OIP5-AS1
chr15
41283990
41309737
+
SNHG25
chr17
64145970
64146476
+
XIST
chrX
73820649
73852723
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA