Entry Detail


General Information

Database ID:exR0461127
RNA Name:hsa-miR-548o-3p
RNA Type:miRNA
Chromosome:chr20
Starnd:+
Coordinate:
Start Site(bp):38516607End Site(bp):38516628
External Links:hsa-miR-548o-3p



Disease Information

Disease Name:Clear Cell Renal Cell Carcinoma
Disease Category:Cancers
MeSH ID:D002292
Type:Neoplasms/Urogenital Neoplasms
Alias:Carcinoma, Renal Cell//Carcinomas, Renal Cell//Renal Cell Carcinomas//Adenocarcinoma, Renal Cell//Adenocarcinomas, Renal Cell//Renal Cell Adenocarcinoma//Renal Cell Adenocarcinomas//Adenocarcinoma Of Kidney//Adenocarcinoma Of Kidneys//Kidney, Adenocarcinoma Of//Kidneys, Adenocarcinoma Of//Renal Cell Cancer//Cancer, Renal Cell//Cancers, Renal Cell//Renal Cell Cancers//Adenocarcinoma, Renal//Adenocarcinomas, Renal//Renal Adenocarcinoma//Renal Adenocarcinomas//Nephroid Carcinoma//Carcinoma, Nephroid//Carcinomas, Nephroid//Nephroid Carcinomas//Renal Cell Carcinoma//Chromophobe Renal Cell Carcinoma//Sarcomatoid Renal Cell Carcinoma//Papillary Renal Cell Carcinoma//Renal Cell Carcinoma, Papillary//Chromophil Renal Cell Carcinoma//Clear Cell Renal Cell Carcinoma//Grawitz Tumor//Tumor, Grawitz//Clear Cell Renal Carcinoma//Carcinoma, Hypernephroid//Carcinomas, Hypernephroid//Hypernephroid Carcinoma//Hypernephroid Carcinomas//Hypernephroma//Hypernephromas//Collecting Duct Carcinoma (Kidney)//Carcinoma, Collecting Duct (Kidney)//Carcinomas, Collecting Duct (Kidney)//Collecting Duct Carcinomas (Kidney)//Collecting Duct Carcinoma of the Kidney//Renal Collecting Duct Carcinoma//Collecting Duct Carcinoma//Carcinoma, Collecting Duct//Carcinomas, Collecting Duct//Collecting Duct Carcinomas



Expression Detail

GEO ID:GSE129255
Description:Urinary exosome miR-30c-5p as a biomarker of clear cell renal cell carcinoma that inhibits progression by targeting HSPA5
Experimental Design:Cancer vs Control
Case Disease Type:Clear Cell Renal Cell Carcinoma
Case Disease SubType:NA
Case Sample:Clear Cell Renal Cell Carcinoma
Control Sample:Healthy
Number of Case:3
Number of Control:1
Number of Samples:4





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABCC5
chr3
183919934
184017939
-
CAMTA1
chr1
6785454
7769706
+
CDK6
chr7
92604921
92836594
-
FUBP3
chr9
130578965
130638352
+
SEC63
chr6
107867756
107958208
-
SEPHS2
chr16
30443631
30445874
-
miRNA targets:NA
circRNA targets:
circRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa_circ_0000712
chr16
68208276
68225678
+
hsa_circ_0000943
chr19
47421744
47440665
+
hsa_circ_0001151
chr20
35236117
35236221
+
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC016876.2
chr17
7581964
7584086
-
AC022167.2
chr16
8848105
8860456
+
FGD5-AS1
chr3
14920347
14948424
-
GAS5
chr1
173858559
173868882
-
LINC00662
chr19
27681072
27794005
-
MALAT1
chr11
65497688
65506516
+
MCM3AP-AS1
chr21
46229196
46259390
+
MIR17HG
chr13
91347820
91354579
+
NEAT1
chr11
65422774
65445540
+
NUTM2A-AS1
chr10
87201647
87342612
-
OIP5-AS1
chr15
41283990
41309737
+
SNHG15
chr7
44983023
44986961
-
TUG1
chr22
30969245
30979395
+
ZFAS1
chr20
49278178
49299600
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA